@prefix dcat: <http://www.w3.org/ns/dcat#> .
@prefix dct: <http://purl.org/dc/terms/> .
@prefix foaf: <http://xmlns.com/foaf/0.1/> .
@prefix vcard: <http://www.w3.org/2006/vcard/ns#> .
@prefix xsd: <http://www.w3.org/2001/XMLSchema#> .

<https://opendata.teagasc.ie/dataset/643b11d9-a4f7-4a63-8b2d-c6a4c4e071bd> a dcat:Dataset ;
    dct:identifier "643b11d9-a4f7-4a63-8b2d-c6a4c4e071bd" ;
    dct:issued "2026-10-07T15:31:23"^^xsd:dateTime ;
    dct:language "en" ;
    dct:modified "2026-10-08T08:28:07"^^xsd:dateTime ;
    dct:provenance "Publicly available bulked resequencing data from Meade et al. (2020) were downloaded from the read archives (ESM S1). The new KASP assays were validated on potato breeding material across three years, with PCN resistance phenotypes. k-mers were counted in resistant and susceptible sequencing pools, and H1-associated k-mers extracted by set subtraction (CoSSA), testing several depth thresholds (ESM S2, S3). The retained k-mers were mapped to the DM reference genome to identify candidate SNPs near the 57R region (ESM S5). Two SNPs were converted to KASP assays and their classification accuracy compared with the previously published marker against phenotypic PCN resistance (ESM S4)" ;
    dct:publisher <https://opendata.teagasc.ie/organization/9cf31806-11fa-422c-b1d4-a68a52abd204> ;
    dct:relation "Meade, F., Byrne, S., Griffin, D. et al. Rapid Development of KASP Markers for Disease Resistance Genes Using Pooled Whole-Genome Resequencing. Potato Res. 63, 57–73 (2020). https://doi.org/10.1007/s11540-019-09428-x",
        "Vexler L, Clot CR, Byrne S et al. k-mer analysis of publicly available resources enables rapid development of an improved KASP marker linked to the H1 resistance locus in potato [version 1; peer review: awaiting peer review]. Open Res Europe 2026, 6:342 (https://doi.org/10.12688/openreseurope.23753.1)",
        "Zenodo record 19629845, Version v1, published 17 April 2026, in the IPMorama community: https://doi.org/10.5281/zenodo.19629845" ;
    dct:title "KASP Marker Development for Potato H1 Resistance via Public K-mer Analysis" ;
    dcat:contactPoint [ a vcard:Organization ;
            vcard:fn "Stephen Byrne " ;
            vcard:hasEmail <mailto:stephen.byrne@teagasc.ie> ] ;
    dcat:keyword "K-mer analysis",
        "Molecular markers",
        "Potato",
        "Solanum tuberosum" ;
    dcat:landingPage <https://zenodo.org/records/19629845> ;
    dcat:theme <crops_environment_and_land_use> .

<https://opendata.teagasc.ie/organization/9cf31806-11fa-422c-b1d4-a68a52abd204> a foaf:Organization ;
    foaf:name "Crops Research" .